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RESEARCH SCIENTIST/ENGINEER 3

University of Washington

Details

Posted: 07-Oct-22

Location: Seattle, Washington

Type: Full Time

Salary: Open

Internal Number: 213423

As a UW employee, you have a unique opportunity to change lives on our campuses, in our state and around the world. UW employees offer their boundless energy, creative problem solving skills and dedication to build stronger minds and a healthier world.

UW faculty and staff also enjoy outstanding benefits, professional growth opportunities and unique resources in an environment noted for diversity, intellectual excitement, artistic pursuits and natural beauty.

The Department of Immunology has an outstanding opportunity for a Research Scientist/Engineer 3 to join their team.

This position supports two major programs in the Gale lab utilizing bioinformatics and computational modeling approaches to study the host response to viral infection and vaccination: 1) the Nonhuman Primate Functional Genomics Core (NHP-FGC) for AIDS Vaccine Research and Development and 2) the High-throughput Molecular Profiling Core and the Computational Data Analysis Core within the Division of NHP Systems Biology at the Washington National Primate Research Center.

DUTIES AND RESPONSIBILITIES

Conduct computational analysis of bulk RNA-sequencing, single cell RNA-sequencing, nCounter gene expression assays, spatial transcriptomics datasets, and iCLIP datasets.

Execute quality control of raw data, differential expression analysis, functional analysis, correlation analysis, and statistical modeling to integrate multiple data types.

Integrate data sets from multiple platforms, including public and private repositories.

Perform viral genome sequencing analysis and variant calling.

Write and maintain computer scripts necessary to complete the analyses described above.

Apply published computational approaches to generate novel findings.

Develop or maintain current sequencing and data analysis pipelines.

Contribute to manuscripts, posters, and grant applications.

MINIMUM REQUIREMENTS

Master's Degree in biological sciences, computational genomics, or a related field with at least three years of experience in computational data analysis. B.S. degree with experience gained through undergraduate coursework, research experience, or internships is acceptable on a case-by-case basis with demonstrated skill sets.

Equivalent education/experience will substitute for all minimum qualifications except when there are legal requirements, such as a license/certification/registration.

ADDITIONAL REQUIREMENTS

Minimum three to five years of job related experience.

Strong command line experience in Linux and R. Most statistical analyses would be conducted in the R language and presented as R markdowns.

Must have a demonstrated track record of computational analysis of omics data.

Must be able to work independently and have strong attention to detail, including the ability to organize and maintain accurate records.

Must be highly motivated with excellent time management skills.

DESIRED QUALIFICATIONS

Expert-level experience in Linux and R/Rmarkdown.

Background in virology or immunology

Application Process: The application process for UW positions may include completion of a variety of online assessments to obtain additional information that will be used in the evaluation process. These assessments may include Work Authorization, Cover Letter and/or others. Any assessments that you need to complete will appear on your screen as soon as you select “Apply to this position”. Once you begin an assessment, it must be completed at that time; if you do not complete the assessment you will be prompted to do so the next time you access your “My Jobs” page. If you select to take it later, it will appear on your "My Jobs" page to take when you are ready. Please note that your application will not be reviewed, and you will not be considered for this position until all required assessments have been completed.

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About University of Washington

Founded in 1861, the University of Washington is one of the oldest public institutions in the west coast and one of the preeminent research universities in the world. The University of Washington is a multi-campus university comprised of three different campuses: Seattle, Tacoma, and Bothell. The Seattle campus is made up of sixteen schools and colleges that serve students ranging from an undergraduate level to a doctoral level. The university is home to world-class libraries, arts, music, drama, and sports, as well as the highest quality medical care in Washington State and a world-class academic medical center. The teaching and research of the University’s many professional schools provide undergraduate and graduate students the education necessary toward achieving an excellence that will serve the state, the region, and the nation. As part of a large and diverse community, the University of Washington serves more students than any other institution in the Northwest.

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